Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915574.1_cds_XP_016465371.1_58328
CDS Infomation

[gene=LOC107788209] [db_xref=GeneID:107788209] [protein=probable pectinesterase/pectinesterase inhibitor 33] [protein_id=XP_016465371.1] [location=join(33129..34038,34824..35518)] [gbkey=CDS]
Sequence

ATGACAACTTATAAGCTCAATTCTTTTGTACTCTTTATATTCTTTTCCTTCTCTTTGTTC
CTACACCAATCTTATTCCATTGAAGAACAAACAAGTGATGATATTAACTGGTGGTGTAGC
ACCACTCCTCATCCTGAGCCATGTAAGTACTTGATGGCAGATGTTTCCCCCCAGCGTTAC
AAACCGAAATGTAAACAAGAGTTTCGAACCATGACCACGGAGGTCGCCTTGGAGCAAGCC
CTCCAAGTACAAAAACACGCGAAAAATGTTGGCCAGCACTGCCGCGGAAAACGAAAGAAA
CTAGTCTGGATGGATTGTGACAAGCTCATTGACGACACCATCCTCCAATTAAACCGTACT
CTTCATGGCATCCAATCCAACTCCACTTCCTGTTCCGATTTCGATGCTCAAACTTGGCTC
AGCGCCTCGTTAACAAATATTGAAACATGTTTATCTAGTTCAAATCAGCTCAATGTTTCA
AATGTCCTACATCCAACTTTATCCACTAATGTCTCTCAATTGATTAGCAATTGTTTGGCT
ATAAATGGGGAGCTTGTGGATTCACAAAATTCAACACAAGTAGATGGATTTCCAAGTTGG
GTTACGGCTAGGGAAAGAAAGTTGTTACAATCCACAACGAGGAGCTTAGCTTCCAAGGCA
ATTTACGTGGTGGCTCAAGATGGATCAGGGAATTTTCGGTCTGTTCAGGCTGCAATAAAT
GCAGCCTCAAAGAAAGTTGCAAATCAGAGGACTATCATATATATTAAAAAAGGTGTTTAT
AGAGAAAATGTGGCTATAGGGCCTGGAATTAGTAACATCATGTTAGTTGGTGCTGGTTTG
AGATACACAATTATTACGGGTAGCCGAAGTGCCGCTGGAGGTTTCACAACTTACAGTACT
GCAACTGTTGGGGTAGATGGAAATGGATTCATTGCTCGTGGCATCACATTCCGAAACACC
GCAGGTCCAAAAAATGGTCAAGCAGTAGCTCTCCGATCAGCATCTGATCTCTCAGTATTC
TACGCCTGTGGCTTCGAAGGTTACCAAGACACAATCTTTGTCCAATCCCAACGACAATTC
TACAAAACATGTCATATCTACGGGACAATAGACTTCATATTCGGCAACGCCGCTGTTGTT
TTCCAAAATTGTATCATTTTTGTCAGAAGACCCCTAGTTGGCCAAGTCAATGTAATCACA
GCTCAAGGCAGAGGTGACCCTTTTCAGAACACTGGAATATCAATTCACAATTCGAGAATA
ACAGCATCACCGAGCCTTAAGCCAGTGGTTCGAGCATTTCAGACATATTTGGGTCGTCCG
TGGCAGGAATATTCAAGAACGGTTGTAATGAGGTCATATATTGATGGTTTGATTAATCCA
TCAGGATGGTTGCCATGGCTGAATTCTGATTTCGCATTTAAAACTTTGTATTATGGGGAG
CATGGTAATTGGGGTCCTGGTGCTTCGACTAGAAATAGGGTGAAGTGGCCTGGTTACCAT
GTTATAACTAATACAAATGAAGCTTCAAAATTTACTGTTGCGAATCTCATAGGTGGTCGC
TCATGGTTGCCTTCTACTGGTGTGCCATTCACTGCAGGGCTGTGA

Peptide Sequence

PEP ID

XP_016465371.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 33 [Nicotiana tabacum]
Sequence

MTTYKLNSFVLFIFFSFSLFLHQSYSIEEQTSDDINWWCSTTPHPEPCKYLMADVSPQRY
KPKCKQEFRTMTTEVALEQALQVQKHAKNVGQHCRGKRKKLVWMDCDKLIDDTILQLNRT
LHGIQSNSTSCSDFDAQTWLSASLTNIETCLSSSNQLNVSNVLHPTLSTNVSQLISNCLA
INGELVDSQNSTQVDGFPSWVTARERKLLQSTTRSLASKAIYVVAQDGSGNFRSVQAAIN
AASKKVANQRTIIYIKKGVYRENVAIGPGISNIMLVGAGLRYTIITGSRSAAGGFTTYST
ATVGVDGNGFIARGITFRNTAGPKNGQAVALRSASDLSVFYACGFEGYQDTIFVQSQRQF
YKTCHIYGTIDFIFGNAAVVFQNCIIFVRRPLVGQVNVITAQGRGDPFQNTGISIHNSRI
TASPSLKPVVRAFQTYLGRPWQEYSRTVVMRSYIDGLINPSGWLPWLNSDFAFKTLYYGE
HGNWGPGASTRNRVKWPGYHVITNTNEASKFTVANLIGGRSWLPSTGVPFTAGL

Transcript Sequence

Gene sequence data has not been registered.